Course material for the part about R and RStudio of the PhD course.

Tools to design and analyse CRISPRi experiments

Some helpers for HTS data analyses.

Some scripts to plot results from my HTS pipelines.

Some helpers for my HTS snakemake workflows.

Some helpers to call DESeq2 using rpy2 in python.

Defining small RNAs in C. elegans.

Some wrappers for my snakemake HTS pipelines

Utilities to collapse reads in bam files to their 5' end

Django Data Import Utilities

Utilities to make stats and plots from reads.

Some experiments with parallel and functional programming.

Repository for snakemake rules

Repository for snakemake rules