GitLab

library to visualize biological data: http://rplanel.pages.pasteur.fr/bioviz-js

Deprojection of a 2D segmentation onto a 2.5D mesh

Local z-projection via the determination of a plane of reference.

Compute and display the intensity evolution for regions of interests (ROIs) through time. Results can be refreshed automatically as ROIs are changed.

A module handling basic fonctionnality needed in django project such as base.html using bootstrap, account settings, preferences management, ...

Repository for snakemake rules

A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium

iPPI-DB - django application

Creating an AGP file from a FASTA-formatted scaffold sequence file

Miscellaneous python things to deal with bam files

Some helpers for HTS data analyses.

Utilities to make stats and plots from reads.

compress nd2 files