INSTALL.txt

README.md

example/Liver_GuitarPlot.txt

example/Liver_Motif.txt

example/Liver_Motif_DiffPeaks.txt

run.sh

src/R/analysis_salmon_dexseq.R

src/R/diff_methyl.R

src/R/motif_analysis.R

src/R/run_guitar_plot.R

src/R/venns.R

src/bash/genome.sh

src/bash/setup.sh

src/python/motif/__init__.py

src/python/motif/create_fimo_sh.py

src/python/motif/create_motif_table.py

src/python/motif/parse_motif_search.py

src/python/motif/regroup_figures_motif.py