Commits · f116fef6a032a21d2cf2be169554650c210569aa · hub / MeRIPSeq · GitLab

Snippets Groups Projects

Jun 07, 2019
- Update of run.sh adding Salmon, Motif and GuitarPlot · f116fef6
  becavin christophe authored 5 years ago
  
  f116fef6
Jun 06, 2019
- Modify run.sh previous to publication · ce848d54
  becavin christophe authored 5 years ago
  
  ce848d54
- Merge branch 'master' of gitlab.pasteur.fr:hub/MeRIPSeq · 407f925a
  becavin christophe authored 5 years ago
```
Need fusion of branches for final publication
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  407f925a
- Fusion with local branch : motif search · 4eef164e
  becavin christophe authored 5 years ago
  
  4eef164e
- Merge branch 'master' of https://gitlab.pasteur.fr/hub/MeRIPSeq · 46418db8
  Christophe BECAVIN authored 5 years ago
  
  46418db8
- Add salmon for splicing study and venns.R for list of peaks comparison +... · c71e1e7a
  Christophe BECAVIN authored 5 years ago
```
Add salmon for splicing study and venns.R for list of peaks comparison + cleaning whole folder for publiation
```
  c71e1e7a
May 28, 2019
- Motif creation scripts · ac207465
  christophebecavin authored 5 years ago
  
  ac207465
- Motif creation scripts · cba3f9ef
  christophebecavin authored 5 years ago
  
  cba3f9ef
- Motif creation scripts · eace1e8a
  christophebecavin authored 5 years ago
  
  eace1e8a
- Motif creation scripts · ee407d3c
  christophebecavin authored 5 years ago
  
  ee407d3c
May 27, 2019
- Motif search update · c9433b46
  becavin christophe authored 5 years ago
  
  c9433b46
- Repository cleaning · 7eb565e1
  becavin christophe authored 5 years ago
  
  7eb565e1
- Prepare publication : Modification of workflow for final draft · b53bb354
  Christophe BECAVIN authored 5 years ago
  
  b53bb354
- Prepare publication : Modification of workflow for final draft · b1472d0d
  Christophe BECAVIN authored 5 years ago
  
  b1472d0d
Apr 23, 2019
- Add cutoff on fasta size · e161aa07
  christophebecavin authored 5 years ago
  
  e161aa07
- Add cutoff on fasta size · 5883b2f7
  christophebecavin authored 5 years ago
  
  5883b2f7
- Add motif scripts · 8141efa4
  christophebecavin authored 5 years ago
  
  8141efa4
- Big Commit before publication · f797c9eb
  Christophe BECAVIN authored 5 years ago
  
  f797c9eb
Jan 10, 2019
- Add search for hyper and hypo diff methyl sites · e7701f9e
  Christophe BECAVIN authored 6 years ago
  
  e7701f9e
Dec 29, 2018
- Create RunSlurmExample.sh · f3355b10
  Christophe BECAVIN authored 6 years ago
  
  f3355b10
Dec 28, 2018
- Update diff_meth.R by removing RNA_IP management · fbe7f857
  Christophe BECAVIN authored 6 years ago
  
  fbe7f857
- Clean motif occurence search · 9e26d933
  Christophe BECAVIN authored 6 years ago
  
  9e26d933
- Remove loading of IP datasest for transcriptomics - diffmethyl.R · 06852766
  Christophe BECAVIN authored 6 years ago
  
  06852766
- Remove loading of IP datasest for transcriptomics - diffmethyl.R · 1dc37f73
  Christophe BECAVIN authored 6 years ago
  
  1dc37f73
- Modify RunMapping.sh · 1eecf58e
  Christophe BECAVIN authored 6 years ago
  
  1eecf58e
Dec 27, 2018
- move find_peak_center to find_peak_max · 52c03560
  Christophe BECAVIN authored 6 years ago
  
  52c03560
- Modify motif occurence search · adda2a09
  Christophe BECAVIN authored 6 years ago
  
  adda2a09
- Cleaning whole repository - putting deprecated files in separated folder -... · 0f80bb21
  Christophe BECAVIN authored 6 years ago
```
Cleaning whole repository - putting deprecated files in separated folder - Modifying diff_methyl.R for saving in RData
```
  0f80bb21
- Modify Bash slurm script - remove array parameter · d344b1b1
  Christophe BECAVIN authored 6 years ago
  
  d344b1b1
Dec 26, 2018
- Merge branch 'master' of https://gitlab.pasteur.fr/hub/MeRIPSeq · 661b5597
  Christophe BECAVIN authored 6 years ago
  
  661b5597
- Bash slurm · c7ac762d
  Christophe BECAVIN authored 6 years ago
  
  c7ac762d
- Motif analysis + tss analysis · 682b8ef9
  Christophe BECAVIN authored 6 years ago
  
  682b8ef9
- Motif search update · 98668cf7
  Christophe BECAVIN authored 6 years ago
  
  98668cf7
Dec 17, 2018
- Motif search improvement · 3356bfc9
  Christophe BECAVIN authored 6 years ago
  
  3356bfc9
- Merge branch 'master' of gitlab.pasteur.fr:hub/MeRIPSeq · aeb51b07
  Christophe BECAVIN authored 6 years ago
```
Merge .gitignore
```
  aeb51b07
- Motif search improvement · ce98a211
  Christophe BECAVIN authored 6 years ago
  
  ce98a211
Dec 12, 2018
- Update R on server · b1321125
  Christophe BECAVIN authored 6 years ago
  
  b1321125
- Parse motif modified · 5b3d10a3
  Christophe BECAVIN authored 6 years ago
  
  5b3d10a3
- Delete README.txt · c1a1719c
  Christophe BECAVIN authored 6 years ago
  
  c1a1719c
- Add contribution guide · 76bec54c
  Christophe BECAVIN authored 6 years ago
  
  76bec54c