Commits · ee407d3cbfff39518103ed1270abce262de2acf8 · hub / MeRIPSeq · GitLab

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May 28, 2019
- Motif creation scripts · ee407d3c
  christophebecavin authored 5 years ago
  
  ee407d3c
May 27, 2019
- Repository cleaning · 7eb565e1
  becavin christophe authored 5 years ago
  
  7eb565e1
- Prepare publication : Modification of workflow for final draft · b53bb354
  Christophe BECAVIN authored 5 years ago
  
  b53bb354
- Prepare publication : Modification of workflow for final draft · b1472d0d
  Christophe BECAVIN authored 5 years ago
  
  b1472d0d
Apr 23, 2019
- Add cutoff on fasta size · e161aa07
  christophebecavin authored 5 years ago
  
  e161aa07
- Add cutoff on fasta size · 5883b2f7
  christophebecavin authored 5 years ago
  
  5883b2f7
- Add motif scripts · 8141efa4
  christophebecavin authored 5 years ago
  
  8141efa4
- Big Commit before publication · f797c9eb
  Christophe BECAVIN authored 5 years ago
  
  f797c9eb
Jan 10, 2019
- Add search for hyper and hypo diff methyl sites · e7701f9e
  Christophe BECAVIN authored 6 years ago
  
  e7701f9e
Dec 29, 2018
- Create RunSlurmExample.sh · f3355b10
  Christophe BECAVIN authored 6 years ago
  
  f3355b10
Dec 28, 2018
- Update diff_meth.R by removing RNA_IP management · fbe7f857
  Christophe BECAVIN authored 6 years ago
  
  fbe7f857
- Clean motif occurence search · 9e26d933
  Christophe BECAVIN authored 6 years ago
  
  9e26d933
- Remove loading of IP datasest for transcriptomics - diffmethyl.R · 06852766
  Christophe BECAVIN authored 6 years ago
  
  06852766
- Remove loading of IP datasest for transcriptomics - diffmethyl.R · 1dc37f73
  Christophe BECAVIN authored 6 years ago
  
  1dc37f73
- Modify RunMapping.sh · 1eecf58e
  Christophe BECAVIN authored 6 years ago
  
  1eecf58e
Dec 27, 2018
- move find_peak_center to find_peak_max · 52c03560
  Christophe BECAVIN authored 6 years ago
  
  52c03560
- Modify motif occurence search · adda2a09
  Christophe BECAVIN authored 6 years ago
  
  adda2a09
- Cleaning whole repository - putting deprecated files in separated folder -... · 0f80bb21
  Christophe BECAVIN authored 6 years ago
```
Cleaning whole repository - putting deprecated files in separated folder - Modifying diff_methyl.R for saving in RData
```
  0f80bb21
- Modify Bash slurm script - remove array parameter · d344b1b1
  Christophe BECAVIN authored 6 years ago
  
  d344b1b1
Dec 26, 2018
- Merge branch 'master' of https://gitlab.pasteur.fr/hub/MeRIPSeq · 661b5597
  Christophe BECAVIN authored 6 years ago
  
  661b5597
- Bash slurm · c7ac762d
  Christophe BECAVIN authored 6 years ago
  
  c7ac762d
- Motif analysis + tss analysis · 682b8ef9
  Christophe BECAVIN authored 6 years ago
  
  682b8ef9
- Motif search update · 98668cf7
  Christophe BECAVIN authored 6 years ago
  
  98668cf7
Dec 17, 2018
- Motif search improvement · 3356bfc9
  Christophe BECAVIN authored 6 years ago
  
  3356bfc9
- Merge branch 'master' of gitlab.pasteur.fr:hub/MeRIPSeq · aeb51b07
  Christophe BECAVIN authored 6 years ago
```
Merge .gitignore
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  aeb51b07
- Motif search improvement · ce98a211
  Christophe BECAVIN authored 6 years ago
  
  ce98a211
Dec 12, 2018
- Update R on server · b1321125
  Christophe BECAVIN authored 6 years ago
  
  b1321125
- Parse motif modified · 5b3d10a3
  Christophe BECAVIN authored 6 years ago
  
  5b3d10a3
- Delete README.txt · c1a1719c
  Christophe BECAVIN authored 6 years ago
  
  c1a1719c
- Add contribution guide · 76bec54c
  Christophe BECAVIN authored 6 years ago
  
  76bec54c
- Add CHANGELOG · d8deafa0
  Christophe BECAVIN authored 6 years ago
  
  d8deafa0
- Update README.md · c4289915
  Christophe BECAVIN authored 6 years ago
  
  c4289915
- Update README.md · 426821f3
  Christophe BECAVIN authored 6 years ago
  
  426821f3
- Update README.md · 793629cf
  Christophe BECAVIN authored 6 years ago
  
  793629cf
- Add README.md · 48cb3f4d
  Christophe BECAVIN authored 6 years ago
  
  48cb3f4d
Dec 06, 2018
- Big update: Add all scripts for Slurm · 364e6afc
  Christophe BECAVIN authored 6 years ago
  
  364e6afc
- Add old python files before cleaning the whole workflow · a98fbcca
  Christophe BECAVIN authored 6 years ago
  
  a98fbcca
- Add local files for motif analysis · 925d5b4d
  Christophe BECAVIN authored 6 years ago
  
  925d5b4d
- Big update : Cleaning repository · 46dfee14
  Christophe BECAVIN authored 6 years ago
  
  46dfee14
- Big update : Add Rpackage, Add peak max coverage, Add mean coverage calc, Add... · ab0e30ef
  Christophe BECAVIN authored 6 years ago
```
Big update : Add Rpackage, Add peak max coverage, Add mean coverage calc, Add Tars scripts, Optimize whole workflow
```
  ab0e30ef