@@ -21,7 +21,8 @@ ChIPseq analyis done using hg19.
...
@@ -21,7 +21,8 @@ ChIPseq analyis done using hg19.
* Go to http://great.stanford.edu/public/html/
* Go to http://great.stanford.edu/public/html/
* Choose test and backgroung regions <details>
* Choose test and backgroung regions
<details>
<summarymarkdown="span">How how you chose the background regions?</summary>
<summarymarkdown="span">How how you chose the background regions?</summary>
Depends on your question: Do you want to compare the functional enrichment in comparison to any random region of the region (Whole genome) or, else, in comparison to a given subset of regions that may have a specific genomic context (e.g. all the SUMO peaks that change along the CC).
Depends on your question: Do you want to compare the functional enrichment in comparison to any random region of the region (Whole genome) or, else, in comparison to a given subset of regions that may have a specific genomic context (e.g. all the SUMO peaks that change along the CC).