Skip to content
Snippets Groups Projects
Commit c5b18e2e authored by Rachel  LEGENDRE's avatar Rachel LEGENDRE
Browse files

Update README.md

parent ff4018f2
No related branches found
No related tags found
No related merge requests found
......@@ -83,7 +83,7 @@ Execute the workflow locally via
using $N cores or run it in a cluster environment via
`snakemake --use-singularity --singularity-args "-B '/home/login/'" --cluster-config config/cluster_config.json --cluster "sbatch --mem={cluster.ram} --cpus-per-task={threads} " -j 200 --nolock`
`snakemake --use-singularity --singularity-args "-B '$HOME'" --cluster-config config/cluster_config.json --cluster "sbatch --mem={cluster.ram} --cpus-per-task={threads} " -j 200 --nolock --cores $SLURM_JOB_CPUS_PER_NODE`
Visualize how the rules are connected via
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment