fixe issue with star index

Snakefile

@@ -212,8 +212,8 @@ if config["star_mapping"]["do"]:
     star_index_fasta = unpack(mapping_index)
     star_mapping_splice_file = unpack(annot_index)
     star_index_log = "02-Mapping/STAR/logs/STAR_{REF}_indexing.log"
-    star_index_output_done = config["genome"]["genome_directory"]+"{REF}/STAR/{REF}.1.bt2"
-    star_index_output_dir = config["genome"]["genome_directory"]+"{REF}/STAR/{REF}" 
+    star_index_output_done = config["genome"]["genome_directory"]+"{REF}/STAR/SAindex"
+    star_index_output_dir = config["genome"]["genome_directory"]+"{REF}/STAR/" 
  
     include: os.path.join(RULES, "star_index.rules")