update ci

.gitlab-ci.yml

@@ -193,6 +193,24 @@ lint:
     MEILI_HOST: "http://localhost:7700"
   script:
     # - rm data/list-systems.json
+    # SYSTEM OPERON STRUCUTRE
+    - >
+      df-wiki-cli 
+      meilisearch 
+      delete-all-documents system-operon-structure
+    - >
+      df-wiki-cli 
+      content 
+      system-operon-structure 
+      --tag "1.2.2" 
+      --version "1.2.2" 
+      --output data/system-structures.csv
+    - >
+      df-wiki-cli 
+      meilisearch 
+      update system-operon-structure 
+      --file data/system-structures.csv
+
     ###### REFSEQ
     # delete all document refseq
     - >
@@ -304,25 +322,18 @@ lint:
       update systems
       --file data/list-systems.json
     # STRUCTURE
+    - >
+      df-wiki-cli 
+      meilisearch 
+      delete-all-documents structure
     - >
       df-wiki-cli
       meilisearch 
       --host ${MEILI_HOST}
       --key "${MEILI_MASTER_KEY}"
       update structure
-      --file data/all_predictions_statistics_clean.csv
+      --file data/all_predictions_statistics.tsv
 
-    # SYSTEM OPERON STRUCUTRE
-    - >
-      df-wiki-cli 
-      content 
-      system-operon-structure 
-      --version "1.2.4" --output data/system-structures.csv
-    - >
-      df-wiki-cli 
-      meilisearch 
-      update system-operon-structure 
-      --file data/system-structures.csv
 
     # ARTICLES
     - >