Commit 2533e552 authored by Hanna  JULIENNE's avatar Hanna JULIENNE
Browse files

fixed main

parent c10239e2
Pipeline #7899 passed with stages
in 1 minute and 22 seconds
......@@ -34,7 +34,6 @@ def launch_preprocessing(args):
print('processing GWAS: {}'.format(tag))
start = time.time()
gwas = jp.map_gwas.gwas_internal_link(GWAS_table, args.gwas_folder)
GWAS_link = jp.map_gwas.walkfs(args.gwas_folder, args.gwas_filename)[2]
mapgw = jp.map_gwas.map_columns_position(GWAS_link, args.gwas_info)
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