Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
Statistical-Genetics
jass_preprocessing
Commits
2533e552
Commit
2533e552
authored
Nov 29, 2018
by
Hanna JULIENNE
Browse files
fixed main
parent
c10239e2
Pipeline
#7899
passed with stages
in 1 minute and 22 seconds
Changes
1
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
jass_preprocessing/__main__.py
View file @
2533e552
...
...
@@ -34,7 +34,6 @@ def launch_preprocessing(args):
print
(
'processing GWAS: {}'
.
format
(
tag
))
start
=
time
.
time
()
gwas
=
jp
.
map_gwas
.
gwas_internal_link
(
GWAS_table
,
args
.
gwas_folder
)
GWAS_link
=
jp
.
map_gwas
.
walkfs
(
args
.
gwas_folder
,
args
.
gwas_filename
)[
2
]
mapgw
=
jp
.
map_gwas
.
map_columns_position
(
GWAS_link
,
args
.
gwas_info
)
print
(
mapgw
)
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment