Added a hash of all parameters as directory output, for proper resuming

modules/Clean_GWAS.nf

@@ -16,16 +16,16 @@ process Meta_data_GWAS{
 }
 
 process Clean_GWAS{
-    publishDir "${params.output_folder}/harmonized_GWAS_files_${params.ancestry}_${params.current_date}/", pattern: "*.txt", mode: 'copy'
-    publishDir "${params.output_folder}", pattern: "harmonized_GWAS_1_file_${params.ancestry}_${params.current_date}/*.txt", mode: 'copy'
+    publishDir "${params.output_folder}/harmonized_GWAS_files_${params.ancestry}_${params.hash_input}/", pattern: "*.txt", mode: 'copy'
+    publishDir "${params.output_folder}", pattern: "harmonized_GWAS_1_file_${params.ancestry}_${params.hash_input}/*.txt", mode: 'copy'
     input:
         path ref_panel
         path meta_chunk
     output:
-        path "harmonized_GWAS_1_file_${params.ancestry}_${params.current_date}/*.txt", emit: cleaned_gwas_channel
+        path "harmonized_GWAS_1_file_${params.ancestry}_${params.hash_input}/*.txt", emit: cleaned_gwas_channel
         path "*.txt", emit: cleaned_gwas_chr_channel
     """
-    mkdir -p harmonized_GWAS_1_file_${params.ancestry}_${params.current_date}
+    mkdir -p harmonized_GWAS_1_file_${params.ancestry}_${params.hash_input}
     pwd
     ls ${params.gwas_folder}
     echo ${params.gwas_folder}
@@ -37,6 +37,6 @@ process Clean_GWAS{
 
     jass_preprocessing --gwas-info \$full_path --ref-path ${ref_panel} \
         --input-folder ${params.gwas_folder} --diagnostic-folder ${params.diagnostic_folder} \
-        --output-folder ./ --output-folder-1-file harmonized_GWAS_1_file_${params.ancestry}_${params.current_date}/
+        --output-folder ./ --output-folder-1-file harmonized_GWAS_1_file_${params.ancestry}_${params.hash_input}/
     """
 }