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Commit 4e1861f1 authored by mrethore's avatar mrethore
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Change of web address for downloading the resistance database

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......@@ -3,7 +3,7 @@
PATH_DB=$(dirname "$0")
DATE=$(date "+%Y-%m-%d")
## Update Antimicrobial_resistance/AMRFinderPlus
wget --quiet --recursive --no-host-directories --cut-dirs=6 ftp://ftp.ncbi.nlm.nih.gov/pathogen/Antimicrobial_resistance/AMRFinderPlus/database/latest/ -P $PATH_DB/$DATE
wget --quiet --recursive --no-host-directories --cut-dirs=6 https://ftp.ncbi.nlm.nih.gov/pathogen/Antimicrobial_resistance/AMRFinderPlus/database/latest/ -P $PATH_DB/$DATE
version_DB=$(cat $PATH_DB/$DATE/version.txt)
echo "Looking up databases at https://ftp.ncbi.nlm.nih.gov/pathogen/Antimicrobial_resistance/AMRFinderPlus/database/"
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