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Biodiversity and Epidemiology of Bacterial Pathogens
diphtOscan
Commits
c6bfa2bc
Commit
c6bfa2bc
authored
8 months ago
by
mrethore
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Removing deprecated family
parent
35d2083e
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1 merge request
!13
Corynebacterium resistance database update
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data/resistance/Corynebacterium_diphtheriae/fam_Cd.tab
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1 addition, 5 deletions
data/resistance/Corynebacterium_diphtheriae/fam_Cd.tab
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data/resistance/Corynebacterium_diphtheriae/fam_Cd.tab
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View file @
c6bfa2bc
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@@ -11,7 +11,6 @@ narJ MOLECULAR_NITRATE narJ - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 1 MOLECULAR_BIOV
narH MOLECULAR_NITRATE narH - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 1 MOLECULAR_BIOVAR MOLECULAR_BIOVAR narIJHK narIJHK Corynebacterium diphtheriae nitrate reductase subunit beta narH
narG MOLECULAR_NITRATE narG - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 1 MOLECULAR_BIOVAR MOLECULAR_BIOVAR narG narG Corynebacterium diphtheriae nitrate reductase subunit alpha narG
narK MOLECULAR_NITRATE narK - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 1 MOLECULAR_BIOVAR MOLECULAR_BIOVAR narIJHK narIJHK Corynebacterium diphtheriae MFS transporter narK
VIRULENCE_Corynebacterium VIRULENCE - - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 0 VIRULENCE VIRULENCE
tox_pseudotuberculosis tox tox_pseudotuberculosis - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium pseudotuberculosis diphtheria toxin precursor tox
tox_ulcerans tox tox_ulcerans - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium ulcerans diphtheria toxin precursor tox
tox_diphtheriae tox tox_diphtheriae - 0.00 0.00 60.00 80.00 90.00 70.00 90.00 25.00 1 VIRULENCE VIRULENCE TOXIN TOXIN Corynebacterium diphtheriae diphtheria toxin precursor tox
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@@ -36,10 +35,7 @@ DIP2014 ADHESIN_Corynebacterium DIP2014 - 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.0
RhuM ADHESIN_Corynebacterium RhuM - 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1 ADHESIN ADHESIN VIRULENCE/ADHESIN VIRULENCE/ADHESIN RhuM-like protein
cpp ADHESIN_Corynebacterium cpp - 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1 ADHESIN ADHESIN VIRULENCE/ADHESIN VIRULENCE/ADHESIN Endoglycosidase of the EndoE family
DIP2093 ADHESIN_Corynebacterium DIP2093 - 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2 ADHESIN ADHESIN VIRULENCE/ADHESIN VIRULENCE/ADHESIN Csh family fibrillar adhesin-related protein
DIP0543 ADHESIN_Corynebacterium DIP0543 - 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1 ADHESIN ADHESIN VIRULENCE/ADHESIN VIRULENCE/ADHESIN Putative exo-sialidase NanH
SpaA-type_pili ADHESIN_Corynebacterium - - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 0 ADHESIN ADHESIN
SpaD-type_pili ADHESIN_Corynebacterium - - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 0 ADHESIN ADHESIN
SpaH-type_pili ADHESIN_Corynebacterium - - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 0 ADHESIN ADHESIN
DIP0543 ADHESIN_Corynebacterium DIP0543 - 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1 ADHESIN ADHESIN VIRULENCE/ADHESIN VIRULENCE/ADHESIN Putative exo-sialidase NanH
Surface-anchored pilus proteins ADHESIN_Corynebacterium - - 0 0 0.00 0.00 0.00 0.00 0.00 0.00 0 ADHESIN ADHESIN
sapA Surface-anchored pilus proteins sapA - 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1 ADHESIN ADHESIN SapADE_diphtheriae SapADE_diphtheriae Surface-anchored pilus proteins sapA
sapD Surface-anchored pilus proteins sapD - 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1 ADHESIN ADHESIN SapADE_diphtheriae SapADE_diphtheriae Surface-anchored pilus proteins sapD
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