Commits · dev · Amandine PERRIN / pipeline_annotation

16 Sep, 2021 6 commits
- gene name starting by genome name · 136e1c33
  Amandine PERRIN authored Sep 16, 2021
  
  136e1c33
- Merge branch 'master' into dev · 072bbd29
  Amandine PERRIN authored Sep 16, 2021
  
  072bbd29
- Merge branch 'documentation' into dev · 4fc48470
  Amandine PERRIN authored Sep 16, 2021
  
  4fc48470
- add warning on protein names for align step · 40cf4cab
  Amandine PERRIN authored Sep 16, 2021
  
  40cf4cab
- add test when a genome name is included in another one · 64c45ef9
  Amandine PERRIN authored Sep 16, 2021
  
  64c45ef9
- Check that genome name is not included in another genome name · 105574f8
  Amandine PERRIN authored Sep 16, 2021
  
  105574f8
27 Aug, 2021 5 commits
- typo readme · cabd19b5
  Amandine PERRIN authored Aug 27, 2021
  
  cabd19b5
- Merge branch 'dev' · df6c24bc
  Amandine PERRIN authored Aug 27, 2021
  
  df6c24bc
- no target for downloads badge · 6d166bde
  Amandine PERRIN authored Aug 27, 2021
  
  6d166bde
- add downloads badge · 01fe2918
  Amandine PERRIN authored Aug 27, 2021
  
  01fe2918
- add gitter badge commented · 4850c814
  Amandine PERRIN authored Aug 27, 2021
```
gitter badge link is in the readme source file, but commented. See if we really add it later.
```
  4850c814
02 Aug, 2021 18 commits
- no need to export htmlcov from test stage · 31829eda
  Amandine PERRIN authored Aug 02, 2021
  
  31829eda
- no report shown for test steps · 61566189
  Amandine PERRIN authored Aug 02, 2021
  
  61566189
- remove duplicated info for deploy stage · 9c8fb911
  Amandine PERRIN authored Aug 02, 2021
  
  9c8fb911
- coverage html before report · 26ae10d1
  Amandine PERRIN authored Aug 02, 2021
  
  26ae10d1
- version 1.3.1-dev2 · 0ec2a0d3
  Amandine PERRIN authored Aug 02, 2021
  
  0ec2a0d3
- new functionality added, as suggested in issue #17 · 09c9d281
  Amandine PERRIN authored Aug 02, 2021
  
  09c9d281
- report for all tests now working! · e9312e35
  Amandine PERRIN authored Aug 02, 2021
  
  e9312e35
- Use relative paths when generating coverage, instead of absolute paths · fb98ef92
  Amandine PERRIN authored Aug 02, 2021
  
  fb98ef92
- change path for coverage report in setup.cfg · 8b4b7d72
  Amandine PERRIN authored Aug 02, 2021
  
  8b4b7d72
- for each job of test stage, show directory · 39e1a671
  Amandine PERRIN authored Aug 02, 2021
  
  39e1a671
- separate tests into 2 different stage names · 8c9d74cf
  Amandine PERRIN authored Aug 02, 2021
  
  8c9d74cf
- coverage report when func test is before unit test · cdd4de57
  Amandine PERRIN authored Aug 02, 2021
  
  cdd4de57
- add tests for clean_str in config parser · 3d6dbaa5
  Amandine PERRIN authored Aug 02, 2021
  
  3d6dbaa5
- get report of unit tests coverage · 318321a2
  Amandine PERRIN authored Aug 02, 2021
  
  318321a2
- func test first · d78b8866
  Amandine PERRIN authored Aug 02, 2021
  
  d78b8866
- show content of .coverage files · 560ff54c
  Amandine PERRIN authored Aug 02, 2021
  
  560ff54c
- show content of artifacts · 5aafd1e4
  Amandine PERRIN authored Aug 02, 2021
  
  5aafd1e4
- show content of artifacts · a3161561
  Amandine PERRIN authored Aug 02, 2021
  
  a3161561
01 Aug, 2021 10 commits
- move unit test align to func test step · 555fa55a
  Amandine PERRIN authored Aug 01, 2021
  
  555fa55a
- test func only annote-parser · fd32cb22
  Amandine PERRIN authored Aug 01, 2021
  
  fd32cb22
- show dir files before cov report · 11f8ceef
  Amandine PERRIN authored Aug 01, 2021
  
  11f8ceef
- func tests: only prepare · 0eb53226
  Amandine PERRIN authored Aug 01, 2021
  
  0eb53226
- combine both coverages, but only unit test coverage is shown · 7919cb6e
  Amandine PERRIN authored Aug 01, 2021
  
  7919cb6e
- only func cov for now · 41b8656e
  Amandine PERRIN authored Aug 01, 2021
  
  41b8656e
- Merge branch 'documentation' into dev · ba21edfe
  Amandine PERRIN authored Aug 01, 2021
  
  ba21edfe
- only publish coverage for functional tests · 331be6c1
  Amandine PERRIN authored Aug 01, 2021
  
  331be6c1
- avoid using "" in config file string parameters · 6958197b
  Amandine PERRIN authored Aug 01, 2021
  
  6958197b
- remove quote marks surrounding strings in configfile · 5ab9ef44
  Amandine PERRIN authored Aug 01, 2021
  
  5ab9ef44
30 Jul, 2021 1 commit
- uncomment long tests · d3ec33c7
  Amandine PERRIN authored Jul 30, 2021
  
  d3ec33c7