Commit b0f9dc00 authored by Blaise Li's avatar Blaise Li
Browse files

Simpler dependencies.

parent 9d8662b0
Cython
libworkflows @ git+https://bioinfo_utils:tfuTQsSZWMtC5xXJNFJh@gitlab.pasteur.fr/bli/libworkflows.git
libworkflows @ git+https://gitlab.pasteur.fr/bli/libworkflows.git
matplotlib
networkx
numpy
pandas
pyBigWig
# pybedtools @ git+https://github.com/blaiseli/pybedtools.git@fix_missing_headers --global-option="cythonize"
pybedtools @ git+https://github.com/blaiseli/pybedtools.git@pep518
# pybedtools
# pybedtools @ git+https://github.com/blaiseli/pybedtools.git@pep518
pybedtools
# scipy<=1.3.3
scipy>=1.4.2
seaborn
......@@ -38,14 +38,15 @@ setup(
install_requires=[
#"libworkflows @ git+https://gitlab+deploy-token-31:isEzpsgbNf2sJMdUDy2g@gitlab.pasteur.fr/bli/libworkflows.git@744dd79b579577cb6e131653260d7990946be3ad#egg=libworkflows-0.1",
#"libworkflows @ git+https://gitlab+deploy-token-31:isEzpsgbNf2sJMdUDy2g@gitlab.pasteur.fr/bli/libworkflows.git#egg=libworkflows-0.1",
"libworkflows @ git+https://gitlab+deploy-token-31:isEzpsgbNf2sJMdUDy2g@gitlab.pasteur.fr/bli/libworkflows.git",
#"libworkflows @ git+https://gitlab+deploy-token-31:isEzpsgbNf2sJMdUDy2g@gitlab.pasteur.fr/bli/libworkflows.git",
"libworkflows @ git+https://gitlab.pasteur.fr/bli/libworkflows.git",
"matplotlib",
"networkx",
"numpy",
"pandas",
"pyBigWig",
"pybedtools @ git+https://github.com/blaiseli/pybedtools.git@pep518",
# "pybedtools",
# "pybedtools @ git+https://github.com/blaiseli/pybedtools.git@pep518",
"pybedtools",
# "scipy<=1.3.3",
"scipy>=1.4.2",
"seaborn"],
......
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