Simpler dependencies.

requirements.txt

 Cython
-libworkflows @ git+https://bioinfo_utils:tfuTQsSZWMtC5xXJNFJh@gitlab.pasteur.fr/bli/libworkflows.git
+libworkflows @ git+https://gitlab.pasteur.fr/bli/libworkflows.git
 matplotlib
 networkx
 numpy
 pandas
 pyBigWig
 # pybedtools @ git+https://github.com/blaiseli/pybedtools.git@fix_missing_headers --global-option="cythonize"
-pybedtools @ git+https://github.com/blaiseli/pybedtools.git@pep518
-# pybedtools
+# pybedtools @ git+https://github.com/blaiseli/pybedtools.git@pep518
+pybedtools
 # scipy<=1.3.3
 scipy>=1.4.2
 seaborn

setup.py

@@ -38,14 +38,15 @@ setup(
     install_requires=[
         #"libworkflows @ git+https://gitlab+deploy-token-31:isEzpsgbNf2sJMdUDy2g@gitlab.pasteur.fr/bli/libworkflows.git@744dd79b579577cb6e131653260d7990946be3ad#egg=libworkflows-0.1",
         #"libworkflows @ git+https://gitlab+deploy-token-31:isEzpsgbNf2sJMdUDy2g@gitlab.pasteur.fr/bli/libworkflows.git#egg=libworkflows-0.1",
-        "libworkflows @ git+https://gitlab+deploy-token-31:isEzpsgbNf2sJMdUDy2g@gitlab.pasteur.fr/bli/libworkflows.git",
+        #"libworkflows @ git+https://gitlab+deploy-token-31:isEzpsgbNf2sJMdUDy2g@gitlab.pasteur.fr/bli/libworkflows.git",
+        "libworkflows @ git+https://gitlab.pasteur.fr/bli/libworkflows.git",
         "matplotlib",
         "networkx",
         "numpy",
         "pandas",
         "pyBigWig",
-        "pybedtools @ git+https://github.com/blaiseli/pybedtools.git@pep518",
-        # "pybedtools",
+        # "pybedtools @ git+https://github.com/blaiseli/pybedtools.git@pep518",
+        "pybedtools",
         # "scipy<=1.3.3",
         "scipy>=1.4.2",
         "seaborn"],