Explore projects

Genome de novo assembly from raw paired-end FASTQ files

A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

Course material for the part about R and RStudio of the PhD course.

Code and data for the article "Integrating information from historical data into mechanistic models for influenza forecasting" by Alessio Andronico, Juliette Paireau and Simon Cauchemez

LIANA: a LIgand-receptor ANalysis frAmework

Trying to deconvolve single tag assignment for multiple molecules

Singularity bootstrap files

Pipeline to run CMS in large-scale analyses

building forests of near-ML trees

Serratus project, read downloader using AWS Batch