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Icy is an open community platform for bioimage informatics

HUB transcriptomic snakemake pipeline

2D viewer for behaving larvae, with manual and automatic behavior tagging capabilities

Downloading FASTQ files from ENA

scientific python course given in 2021

Compute RNA expression around a reference position

Some scripts to plot results from my HTS pipelines.

Utilities to collapse reads in bam files to their 5' end

Find characters shared by a group of aligned sequences

scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)

scripts and instructions to run CWL on tars

Small Haskell utility that extracts an attribute from gtf data.

EMBO Course on Integrative Structural Biology 2019 http://meetings.embo.org/event/19-structural-biology