MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.
Keeping R and Python specific snippets
Sources for the server running at http://hub05.hosting.pasteur.fr/NMD_complexes/
Allows exploration of interactions around NMD complexes (Dehecq et al., EMBOJ 2018)
Source of the shiny server that presents results obtained by large scale double mutant yeast screens (GIM): http://hub05.hosting.pasteur.fr/GIM_interactions/
A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium
Course material for the part about R and RStudio of the PhD course.
Shiny app for the analysis of single cell data