GitLab

Utilities to make a consensus from a sequence alignment.

An Ansible role for managing a PostgreSQL server

Material for Diderot 2020-2021

It is a toy plugin to test semi-supervised texture segmentation using the new SLBPriu texture descriptor.

Create a list of tag and apply them to ROIs.

Manage a list of ROIs that the user can store and pop back in one click.

Compute and display the intensity evolution for regions of interests (ROIs) through time. Results can be refreshed automatically as ROIs are changed.

Toolbox to create and manipulate result tables with plug-ins and protocols, and export as text file or to your favorite spreadsheet software

Provides 3D vector mathematics classes.

A simple tool to correct chromatic shifts as well as temporal drift (including translations and rotations), based on spectral correlation.

Rhino Library for Icy

QuickHull library for Icy. Computes convex envelopes of random point sets in 2D or 3D.

My own toolbox used for all the plugins I developed.

A patched version of the Jama library. Internal structures accessors and package name added. The original version can be found here : http://math.nist.gov/javanumerics/jama/

A toolbox to chain image analysis processes

This plugin is designed to manipulate binary masks over images. It contains all the basic tools to manage such objects.

A open-source utility library for linear programming in Java with the simplex algorithm.

Extracts labeled objects from a binary or labeled image into ROI using connected component analysis