- May 31, 2022
-
-
Veronique Legrand authored
-
- Apr 15, 2022
-
-
Veronique Legrand authored
version 2.0_beta where PE reads are processed separately and selected or removed from the cms if at least one of the PE has a median coverage below threshold.
-
- May 31, 2021
-
-
Veronique Legrand authored
-
- May 27, 2021
-
-
Veronique Legrand authored
-
- May 07, 2021
-
-
Veronique Legrand authored
-
- Apr 28, 2021
-
-
Veronique Legrand authored
-
- Apr 22, 2021
-
-
Veronique Legrand authored
-
- Jun 29, 2017
-
-
Veronique Legrand authored
-
- Apr 11, 2017
-
-
Veronique Legrand authored
-
- Mar 14, 2017
-
-
Veronique Legrand authored
-
- Jan 06, 2017
-
-
Veronique Legrand authored
-
- Dec 01, 2016
-
-
Veronique Legrand authored
-
- May 31, 2016
-
-
Veronique Legrand authored
-
- May 26, 2016
-
-
Veronique Legrand authored
-
Veronique Legrand authored
-
- May 02, 2016
-
-
Veronique Legrand authored
-
- Apr 29, 2016
-
-
Veronique Legrand authored
-
- Apr 19, 2016
-
-
Veronique Legrand authored
did new implementation for using only the max(k-mer value, reverse complement value) in the CMS; updates unit tests accordingly.
-
- Apr 11, 2016
-
-
Veronique Legrand authored
bugfix : now increment the counter for only the biggest hash value obtained for a k-mer and its reverse complement. Before, I incemented both counters and it is not what we want.
-
- Apr 05, 2016
-
-
Veronique Legrand authored
-
- Mar 23, 2016
-
-
Veronique Legrand authored
changed srp structure a little it; replace long by int for a1 and a2. Aim is to be more memory efficient.
-
- Mar 11, 2016
-
-
Veronique Legrand authored
-
- Mar 10, 2016
-
-
Veronique Legrand authored
-
- Mar 08, 2016
-
-
Veronique Legrand authored
-
- Feb 18, 2016
-
-
Veronique Legrand authored
first working implementation of Count min sketch component with a bit shifting hash function. TODO find more effective hash functions.
-